ABOUT THIS RECORDspecies: Oryctolagus cuniculus
miRNA family: miR-1658
source: miRNEST
Taxonomy by NCBI:
Oryctolagus cuniculus Oryctolagus Leporidae Lagomorpha Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGCTGTGGCTAGGTGTTGAT miRNA* TAACACCTAAAATCGGTTTTC mismatches: 4 bulges: 0 |
pre-miRNA
ATAAAAAATAAAAAGGGAACTGAGCTGTGGCTAGGTGTTGATGCCCTGGGTCTGAATATTTATGAGCATGATGACAAGTTAACACCTAAAATCGGTTTTC
CCTGGAGTGAAATCAGAA
dot-bracket secondary structure
.............(((((...((((((....(((((((((((....((.(((((.((....))...)).)))..)).)))))))))))....))))))))
))).((......))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ATAAAAAATAAAAAGGGAACTGAGCTGTGGCTAGGTGTTGATGCCCTGGGTCTGAATATTTATGAGCATGATGACAAGTTAACACCTAAAATCGGTTTTC
CCTGGAGTGAAATCAGAA
dot-bracket secondary structure
.............(((((...((((((....(((((((((((....((.(((((.((....))...)).)))..)).)))))))))))....))))))))
))).((......))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P26044|RADI_PIG: 3e-17 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
