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ABOUT THIS RECORD

ID: MNEST009375
species: Cyprinus carpio
miRNA family: miR-124
source: miRNEST

Taxonomy by NCBI:
Cyprinus carpio Cyprinus Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGTGTTCACAGCGGACCTTGA

miRNA*
AAGGCACGCGGTGAATGCCAA

mismatches: 4
bulges: 0

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pre-miRNA
GCAAACAGGCCTGCTTTTCTTCGTGTTCACAGCGGACCTTGATTTAAATTTCCATACAATTAAGGCACGCGGTGAATGCCAAGAAAGATGGCAAATATCA


dot-bracket secondary structure
........(((...(((((((.((((((((.(((..((((((((.............))))))))..))).)))))))).)))))))..)))........



SIMILARITIES
miRBase dre-mir-124-2: 4e-37

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-124: 3e-35
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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