ABOUT THIS RECORDspecies: Squalus acanthias
miRNA family: miR-3652
source: miRNEST
Taxonomy by NCBI:
Squalus acanthias Squalus Squalidae Squaloidei Squaliformes Hypnosqualea Squalea Neoselachii Elasmobranchii Chondrichthyes Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGCTGCAGGTGTGAGGAGAG miRNA* CTCTGGACTTCTTGCAGCCAT mismatches: 4 bulges: 1 |
pre-miRNA
TGAGGCTGCAGGTGTGAGGAGAGTAGTTGATATGAGAGGTAAGATTTGGGGGAAACAAGATCTCCCTTCTCTTGTCCACTGCCTTGACTAGGGCATCCAA
CACTGCATCAGAGCACCTGGCTACATTCTCTGGACTTCTTGCAGCCAT
dot-bracket secondary structure
...(((((((((.((..(((((((.((((..((((((((........((((((.......)))))).))))))))....((((((....))))))..)))
).(((...)))(((.....)))..)))))))..))..)))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGAGGCTGCAGGTGTGAGGAGAGTAGTTGATATGAGAGGTAAGATTTGGGGGAAACAAGATCTCCCTTCTCTTGTCCACTGCCTTGACTAGGGCATCCAA
CACTGCATCAGAGCACCTGGCTACATTCTCTGGACTTCTTGCAGCCAT
dot-bracket secondary structure
...(((((((((.((..(((((((.((((..((((((((........((((((.......)))))).))))))))....((((((....))))))..)))
).(((...)))(((.....)))..)))))))..))..)))))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
