ABOUT THIS RECORDspecies: Heterodera glycines
miRNA family: mir-942
source: miRNEST
Taxonomy by NCBI:
Heterodera glycines Heterodera Heteroderinae Heteroderidae Tylenchoidea Tylenchina Tylenchida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTCACTGTTTTTGCCATGTT miRNA* CGTGGTGCGACGGTACGCG mismatches: 4 bulges: 2 |
pre-miRNA
TGCCAAGCAGTTGCTCGTCTGCTTCACTGTTTTTGCCATGTTTGTGTTGCTGTCCACTGCATTTGCTTGTTACATTTGCGTGGTGCGACGGTACGCGGAA
CGCATGCGAACAAAA
dot-bracket secondary structure
......(((..(((...(((((...((((((..((((((((..((((.((........((....))..)).))))..)))))))).))))))..))))).
.))))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TGCCAAGCAGTTGCTCGTCTGCTTCACTGTTTTTGCCATGTTTGTGTTGCTGTCCACTGCATTTGCTTGTTACATTTGCGTGGTGCGACGGTACGCGGAA
CGCATGCGAACAAAA
dot-bracket secondary structure
......(((..(((...(((((...((((((..((((((((..((((.((........((....))..)).))))..)))))))).))))))..))))).
.))))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
