ABOUT THIS RECORDspecies: Solenopsis invicta
miRNA family: mir-297
source: miRNEST
Taxonomy by NCBI:
Solenopsis invicta Solenopsis Solenopsidini Myrmicinae Formicidae Vespoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGTGTGTACATGTATATTC miRNA* ATATAAATTACACACATTGA mismatches: 2 bulges: 1 |
pre-miRNA
ATACCAAAGGAATATAAATTACACACATTGACATTTATTTATATAAATTTCCGCTTAATCATATGTGTGTGTGTGTGTACATGTATATTCTATTTCCG
dot-bracket secondary structure
........((((((((.(((((((((((..((((.(((......................))).))))..))))))))).)).)))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ATACCAAAGGAATATAAATTACACACATTGACATTTATTTATATAAATTTCCGCTTAATCATATGTGTGTGTGTGTGTACATGTATATTCTATTTCCG
dot-bracket secondary structure
........((((((((.(((((((((((..((((.(((......................))).))))..))))))))).)).)))))))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
