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ABOUT THIS RECORD

ID: MNEST009647
species: Cochliomyia hominivorax
miRNA family: miR-4171
source: miRNEST

Taxonomy by NCBI:
Cochliomyia hominivorax Cochliomyia Chrysomyini Chrysomyinae Calliphoridae Oestroidea Calyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGACTCTCTTAAGGAAACCAT

miRNA*
GGCTTCCGGAGGGGGTGATG

mismatches: 4
bulges: 1

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pre-miRNA
GTAATGTTTTAGGTGAATTAATGGCTTCCGGAGGGGGTGATGAAAATGACGAAGATCAAGACTCTCTTAAGGAAACCATGCTGGAGACTAATATTTAC

dot-bracket secondary structure
.....(((((.(((......((((.((((.((((((((..(((............)))..))))))))..)))).))))))).)))))..........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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