ABOUT THIS RECORDspecies: Cochliomyia hominivorax
miRNA family: miR-1603
source: miRNEST
Taxonomy by NCBI:
Cochliomyia hominivorax Cochliomyia Chrysomyini Chrysomyinae Calliphoridae Oestroidea Calyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTTTTTGTTTTGTGTTTTTT miRNA* AAAATAGTAATATATAATATAG mismatches: 3 bulges: 1 |
pre-miRNA
TTTAATTACATTAATTTTTTTGTTTTTTGTTTTGTGTTTTTTTAGTAAATTTTGTTAAGATGTTAAATTAAAAAAATAGTAATATATAATATAGAGAGAT
TTTTAAAATATT
dot-bracket secondary structure
(((((.......(((((((((((.((.(((.(((((((((((((((.(((.((.....)).)))..)))))))))))).))).))).)).))))))))))
).))))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTTAATTACATTAATTTTTTTGTTTTTTGTTTTGTGTTTTTTTAGTAAATTTTGTTAAGATGTTAAATTAAAAAAATAGTAATATATAATATAGAGAGAT
TTTTAAAATATT
dot-bracket secondary structure
(((((.......(((((((((((.((.(((.(((((((((((((((.(((.((.....)).)))..)))))))))))).))).))).)).))))))))))
).))))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
