ABOUT THIS RECORDspecies: Cochliomyia hominivorax
miRNA family: mir-467
source: miRNEST
Taxonomy by NCBI:
Cochliomyia hominivorax Cochliomyia Chrysomyini Chrysomyinae Calliphoridae Oestroidea Calyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGTGCATGTGTGTGTGTGT miRNA* TATACATATGTATGCACTAGAG mismatches: 2 bulges: 1 |
pre-miRNA
GTGCAAATGTTTGTGTGCATGTGTGTGTGTGTTTAATTTCCTAAAATTAAATTATACATATGTATGCACTAGAGTTAT
dot-bracket secondary structure
((....)).(((..(((((((((((((((((((((((((....)))))))).)))))))))))))))))..)))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTGCAAATGTTTGTGTGCATGTGTGTGTGTGTTTAATTTCCTAAAATTAAATTATACATATGTATGCACTAGAGTTAT
dot-bracket secondary structure
((....)).(((..(((((((((((((((((((((((((....)))))))).)))))))))))))))))..)))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
