ABOUT THIS RECORDspecies: Haematobia irritans irritans
miRNA family: miR-4218
source: miRNEST
Taxonomy by NCBI:
Haematobia irritans irritans Haematobia irritans Haematobia Stomoxyini Muscinae Muscidae Muscoidea Calyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGATTTTATAAAAAGTAGTA miRNA* CTACATTTTATAATTTCCAAA mismatches: 5 bulges: 0 |
pre-miRNA
TTTGACACTAATACTACATTTTATAATTTCCAAACATGTTTAGGTATTTTTTCTTTAATTAACAACAACATAATAAGATTTTATAAAAAGTAGTATATGT
CAATG
dot-bracket secondary structure
.((((((...(((((((.((((((((..((.....(((((...((................))...))))).....))..)))))))).))))))).)))
)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TTTGACACTAATACTACATTTTATAATTTCCAAACATGTTTAGGTATTTTTTCTTTAATTAACAACAACATAATAAGATTTTATAAAAAGTAGTATATGT
CAATG
dot-bracket secondary structure
.((((((...(((((((.((((((((..((.....(((((...((................))...))))).....))..)))))))).))))))).)))
)))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
