ABOUT THIS RECORDspecies: Lonchura striata domestica
miRNA family: miR-2985
source: miRNEST
Taxonomy by NCBI:
Lonchura striata domestica Lonchura striata Lonchura Estrildinae Estrildidae Passeroidea Passeriformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGGGTGGAATAGTATAACAAT miRNA* TGTTATAGTATCCCACCTACCC mismatches: 2 bulges: 0 |
pre-miRNA
ACCTAAAGGATCTTCATTAAGGTGGGTGGAATAGTATAACAATATGCTAAATGTTGTTATAGTATCCCACCTACCCTGATGTATCTTTACTGAA
dot-bracket secondary structure
.....((((((...(((((.(((((((((.(((.(((((((((((.....))))))))))).))).))))))))).))))).))))))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACCTAAAGGATCTTCATTAAGGTGGGTGGAATAGTATAACAATATGCTAAATGTTGTTATAGTATCCCACCTACCCTGATGTATCTTTACTGAA
dot-bracket secondary structure
.....((((((...(((((.(((((((((.(((.(((((((((((.....))))))))))).))).))))))))).))))).))))))......
SIMILARITIES| miRBase tgu-mir-2985-1: 7e-42 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: tgu-mir-2985-1 from miRBase (MNEST026590) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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