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ABOUT THIS RECORD

ID: MNEST009720
species: Carcinus maenas
miRNA family: mir-46
source: miRNEST

Taxonomy by NCBI:
Carcinus maenas Carcinus Portunidae Portunoidea Heterotremata Heterotremata/Thoracotremata group Eubrachyura Brachyura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTCATGGAGTTGCTCTCTTT

miRNA*
AGAGAGCTATCCGTCGACAGT

mismatches: 3
bulges: 2

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pre-miRNA
TCTGCACTATCAAGAGAGCTATCCGTCGACAGTACTGGAGCCAAACAACTGTCATGGAGTTGCTCTCTTTATGGACAGG

dot-bracket secondary structure
((((..((((.((((((((..(((((.((((((..((........)))))))))))))...)))))))).)))).))))


SIMILARITIES
miRBase bmo-mir-281: 0.000000000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-281: 0.000001
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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