ABOUT THIS RECORDspecies: Bos sp.
miRNA family: mir-29
source: miRNEST
Taxonomy by NCBI:
Bos sp. Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGCACCATTTGAAATCGGT miRNA* CGATTTCTCCTGGTGTTCAGA mismatches: 3 bulges: 1 |
pre-miRNA
ACACAGGCTGACCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTA
dot-bracket secondary structure
..(((...(((((((((((...(((((((.(((...........))))))))))...)))))))))))...))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACACAGGCTGACCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTA
dot-bracket secondary structure
..(((...(((((((((((...(((((((.(((...........))))))))))...)))))))))))...))).
SIMILARITIES| miRBase eca-mir-29c: 3e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-29: 4e-18 | most similar mature miRNAs |
Identical with: eca-mir-29c from miRBase (MNEST026973) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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