ABOUT THIS RECORDspecies: Laupala kohalensis
miRNA family: miR-2163
source: miRNEST
Taxonomy by NCBI:
Laupala kohalensis Laupala Trigonidiinae Gryllidae Grylloidea Ensifera Orthoptera Orthopteroidea Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAACTTGACAGATATATGAAG miRNA* TTGTTTATCAGTCAAGTTTAT mismatches: 4 bulges: 0 |
pre-miRNA
CGTTGATAACATTGTTTATCAGTCAAGTTTATTGGATGAAAAATTGTTGGCGTTACATTTGTAACCTAAATTAACTTTTGGTGAAAACTGACATGTCAGC
ACCATGTCCCCAAATAACTTGACAGATATATGAAGTGTTTTAGG
dot-bracket secondary structure
..((((..((.((((.((((.((((((((..((((...((((.(((((((.(((((....)))))))))..))).))))(((....)))((((((.....
..)))))).))))..)))))))).)))).)))).))...)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CGTTGATAACATTGTTTATCAGTCAAGTTTATTGGATGAAAAATTGTTGGCGTTACATTTGTAACCTAAATTAACTTTTGGTGAAAACTGACATGTCAGC
ACCATGTCCCCAAATAACTTGACAGATATATGAAGTGTTTTAGG
dot-bracket secondary structure
..((((..((.((((.((((.((((((((..((((...((((.(((((((.(((((....)))))))))..))).))))(((....)))((((((.....
..)))))).))))..)))))))).)))).)))).))...)))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
