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ABOUT THIS RECORD

ID: MNEST009822
species: Globodera rostochiensis
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Globodera rostochiensis Globodera Heteroderinae Heteroderidae Tylenchoidea Tylenchina Tylenchida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTGCTGCTGCTGTTGCTCTT

miRNA*
GGGCGACGGTGGAGGCAGCAC

mismatches: 3
bulges: 0

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pre-miRNA
ATCGACGACGGCGGGCGACGGTGGAGGCAGCACAAAAGCGATGTGCATGAAACGCCGCTGCTGCTGCTGCTGTTGCTCTTGTTGCTGTT

dot-bracket secondary structure
..((.((((((.((((((((((((.(((((((.....(((.(((.......))).)))))))))).)))))))))))))))))).))..


SIMILARITIES
miRBase dme-mir-4968: 0.0003

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-598: 0.000005
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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