ABOUT THIS RECORDspecies: Fenneropenaeus chinensis
miRNA family: mir-467
source: miRNEST
Taxonomy by NCBI:
Fenneropenaeus chinensis Fenneropenaeus Penaeidae Penaeoidea Dendrobranchiata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGTGCATGTGTGTGTGTGT miRNA* ACACACGCACGTAGACACACACA mismatches: 1 bulges: 2 |
pre-miRNA
GTTCTTAGATATATATGAATAAATAAACACACACACACGCACGTAGACACACACACACAGACAGACACACATGTGTGTGTCTGCGTGTGTGTGCATGTGT
GTGTGTGTGTGTACGTTAGAACGTATATATTTACGCA
dot-bracket secondary structure
.....((((((((((((..(((....((((((((((((((((((...(((((((((.((((((.((((....)))).)))))).))))))))).))))))
))))))))))))...)))...))))))))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTTCTTAGATATATATGAATAAATAAACACACACACACGCACGTAGACACACACACACAGACAGACACACATGTGTGTGTCTGCGTGTGTGTGCATGTGT
GTGTGTGTGTGTACGTTAGAACGTATATATTTACGCA
dot-bracket secondary structure
.....((((((((((((..(((....((((((((((((((((((...(((((((((.((((((.((((....)))).)))))).))))))))).))))))
))))))))))))...)))...))))))))))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
