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ABOUT THIS RECORD
ID:
MNEST009899
species:
Salvelinus fontinalis
miRNA family:
mir-1322
source:
miRNEST
Taxonomy by NCBI:
Salvelinus fontinalis
Salvelinus
Salmoninae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCTGCTGCTGCTGTTGCTGCA
miRNA*
CATCATCAGCATCACAGTCT
mismatches:
5
bulges:
1
View larger
pre-miRNA
GGGTGAACTTCGAGGCCCTGATCATCGCCATGGCAGTGTTAGGCGGGACTAT
CATCATCAGCATCACAGTCT
GTT
GCTGCTGCTGCTGTTGCTGCA
AGAA
ACGTCAATCAAGGCCAGACAGAGATGAGGAGAGGTTTGCCAGGAG
dot-bracket secondary structure
.((((((((((.....(((.(((.((....((((..((...((((...((..
((.((.(((((.((((((..
...
)))).)).))))).)).))..
))..
.))))...))..))))....))))).))).)))))))))).....
SIMILARITIES
miRBase
dme-mir-4968
:
0.00003
PMRD
no hits
microPC
no hits
UniProt
sp|Q6P767|PTTG_RAT: 0.00008
RFAM
mir-598: 0.000008
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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