ABOUT THIS RECORDspecies: Schmidtea mediterranea
miRNA family: miR-61a
source: miRNEST
Taxonomy by NCBI:
Schmidtea mediterranea Schmidtea Dugesiidae Paludicola Tricladida Seriata Turbellaria Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGTTTGTGAGTTTCTAGGCA miRNA* ACTAGAAAGTTCACTTACTGTT mismatches: 5 bulges: 1 |
pre-miRNA
TTAGAATAGAAACTCTTGATACAGTTTGTGAGTTTCTAGGCAAATAGATTTTTCTATGACTAGAAAGTTCACTTACTGTTGTACGAGTTTTAAACTTC
dot-bracket secondary structure
........(((((((.((..(((((..((((((((((((....(((((....)))))..))))))).)))))..)))))..)).))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTAGAATAGAAACTCTTGATACAGTTTGTGAGTTTCTAGGCAAATAGATTTTTCTATGACTAGAAAGTTCACTTACTGTTGTACGAGTTTTAAACTTC
dot-bracket secondary structure
........(((((((.((..(((((..((((((((((((....(((((....)))))..))))))).)))))..)))))..)).))))))).......
SIMILARITIES| miRBase sme-mir-61a: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
