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ABOUT THIS RECORD
ID:
MNEST009957
species:
Populus trichocarpa x Populus deltoides
miRNA family:
MIRf35
source:
miRNEST
Taxonomy by NCBI:
Populus trichocarpa x Populus deltoides
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACATTGTTGCCCGAGAAGACC
miRNA*
GCTTCTAGGGTGATGAATCA
mismatches:
5
bulges:
1
View larger
pre-miRNA
ATCTCCACACTTAAAACTAGATTTCCTCACTT
GCTTCTAGGGTGATGAATCA
TGATGCCGATAATTAAGGATG
ACATTGTTGCCCGAGAAGACC
GTGGAG
TTCCTGTATTTATGCTGTGGACT
dot-bracket secondary structure
...((((((..((((((..((.((((......
.(((((.(((((((((.(((
(....((.........)))))
)..))))))))).)))))...
..))))
.))..)).))))...))))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record