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ABOUT THIS RECORD

ID: MNEST009959
species: Populus trichocarpa x Populus deltoides
miRNA family: MIRf746
source: miRNEST

Taxonomy by NCBI:
Populus trichocarpa x Populus deltoides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGCGGTGATTGAACGGAGG

miRNA*
TCTTTACTTACCGTNNTAC

mismatches: 4
bulges: 2

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pre-miRNA
TTAGTTTGAGTGGAAGATCTTGGCCGTTGGATTGGCGGTGATTGAACGGAGGGTTGATCCTTTATCAACCTTCTTTACTTACCGTNNTACAGAAGTCAAC
ATTCTATTAAGGCATATC


dot-bracket secondary structure
...((((.(((((((....(((((..(((.....(((((((.(((..(((((((((((.....)))))))))))))).)))))))....)))..))))).
.))))))).)))).....



SIMILARITIES
miRBase no hits

PMRD ptc-miRf10132-akr: 2e-27

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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