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ABOUT THIS RECORD

ID: MNEST009960
species: Populus trichocarpa x Populus deltoides
miRNA family: MIRf519
source: miRNEST

Taxonomy by NCBI:
Populus trichocarpa x Populus deltoides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATATAGCATCATGAGCAATCA

miRNA*
ACTGCTAATGATGTTATATCA

mismatches: 3
bulges: 0

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pre-miRNA
CACACAGATAGCGAAGACCGCATATAGCATCATGAGCAATCAGCCTTAGATTTGAGCAGAGTGACTGCTAATGATGTTATATCATTTTATGAAGCTCCTC
GT


dot-bracket secondary structure
..........((((.((..((.(((((((((((.((((.(((..(((...........)))))).)))).)))))))))))((((...)))).)))).))
))



SIMILARITIES
miRBase no hits

PMRD ath-miRf11142-akr: 0.0000003

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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