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ABOUT THIS RECORD
ID:
MNEST024650
species:
Branchiostoma floridae
miRNA family:
mir-10
source:
miRBase, original name:
bfl-mir-10a
(
MI0010011
)
Taxonomy by NCBI:
Branchiostoma floridae
Branchiostoma
Branchiostomidae
Cephalochordata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACCCTGTAGATCCGAATTTGTG
miRNA*
CAAATTCGTTTCTGCAGGTATA
mismatches:
2
bulges:
1
View larger
pre-miRNA
CTATATG
TACCCTGTAGATCCGAATTTGTG
TGAGGTACCCAAGTCA
CAAATTCGTTTCTGCAGGTATA
ATGTAGCC
dot-bracket secondary structure
(((((((
((((.((((((..((((((((((
...((...))....))
))))))))..))))))))))).
))))))..
SIMILARITIES
miRBase
xtr-mir-10a
:
0.00000000006
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-10: 6e-36
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"