miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST024650
species: Branchiostoma floridae
miRNA family: mir-10
source: miRBase, original name: bfl-mir-10a (MI0010011)

Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACCCTGTAGATCCGAATTTGTG

miRNA*
CAAATTCGTTTCTGCAGGTATA

mismatches: 2
bulges: 1

View larger
pre-miRNA
CTATATGTACCCTGTAGATCCGAATTTGTGTGAGGTACCCAAGTCACAAATTCGTTTCTGCAGGTATAATGTAGCC

dot-bracket secondary structure
(((((((((((.((((((..((((((((((...((...))....))))))))))..))))))))))).))))))..


SIMILARITIES
miRBase xtr-mir-10a: 0.00000000006

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-10: 6e-36

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454

references

[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"




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