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ABOUT THIS RECORD
ID:
MNEST024655
species:
Branchiostoma floridae
miRNA family:
mir-29
source:
miRBase, original name:
bfl-mir-29b
(
MI0010016
)
Taxonomy by NCBI:
Branchiostoma floridae
Branchiostoma
Branchiostomidae
Cephalochordata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCACCATTTGAAATCAGTGCTT
miRNA*
GACTGGTTCCAAGTGGTGGGTAG
mismatches:
2
bulges:
2
View larger
pre-miRNA
CACTGCAGGTTTTCTATCCTGGAA
GACTGGTTCCAAGTGGTGGGTAG
ATGGCACTGAGATCT
AGCACCATTTGAAATCAGTGCTT
TCAGGACTAG
dot-bracket secondary structure
.............(((((((((((
((((((((.((((((((.(.(((
((.........))))
).))))))))).))))))).)))
)))))).)))
SIMILARITIES
miRBase
cte-mir-29b
:
0.000001
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-29: 0.00002
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M,
Evol Dev. 13:15-27(2011).
,
"microRNA complements in deuterostomes: origin and evolution of microRNAs"
[
2
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"