miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST024683
species: Branchiostoma floridae
miRNA family: mir-137
source: miRBase, original name: bfl-mir-137 (MI0010029)

Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATTGCTTGAGAATACACGTGA

miRNA*
ACGGGTATTCTTGGGTTAATAAT

mismatches: 3
bulges: 1

View larger
pre-miRNA
GATAAATACGCACTGCTCGGTCACGGGTATTCTTGGGTTAATAATATACTATTTCTATATTATTGCTTGAGAATACACGTGACTGAGTGTGTGTGAGACT
C


dot-bracket secondary structure
......(((((((.(((((((((((.(((((((..(((.(((((((((.......))))))))))))..))))))).)))))))))))))))))).....
.



SIMILARITIES
miRBase xbo-mir-137: 0.000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-137: 1e-50

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454

references

[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"




Liczniki na strone;