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ABOUT THIS RECORD

ID: MNEST024697
species: Branchiostoma floridae
miRNA family: mir-217
source: miRBase, original name: bfl-mir-217 (MI0010040)

Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTGCATCAGGAACTGATTGGA

miRNA*
CAATCTGTTCCTCATGCATGGC

mismatches: 3
bulges: 1

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pre-miRNA
CTGGGACTACTGCATCAGGAACTGATTGGATGGGATACAAATCAATCTGTTCCTCATGCATGGCTCAC

dot-bracket secondary structure
.((((.(((.(((((.((((((.((((((...(....)...)))))).)))))).)))))))))))).


SIMILARITIES
miRBase dre-mir-217-1: 0.0000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-217: 7e-32

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454

references

[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"




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