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ABOUT THIS RECORD

ID: MNEST024704
species: Branchiostoma floridae
miRNA family: mir-375
source: miRBase, original name: bfl-mir-375 (MI0010045)

Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTTCGTTCGGCTCGCGTTATCT

miRNA*
ACAGGCCGAGCCTGGCGAGCAAA

mismatches: 3
bulges: 2

View larger
pre-miRNA
GCCACATCCCTGCCCAGACAGGCCGAGCCTGGCGAGCAAAGCTGTGTCTAAACTTAACGTTTTGTTCGTTCGGCTCGCGTTATCTTGGCATGGGCTATCG
T


dot-bracket secondary structure
.......(((((((.(((..(((((((((..(((((((((((.((...........)))))))))))))..)))))).))).))).)))).)))......
.



SIMILARITIES
miRBase xtr-mir-375: 0.00000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-375: 3e-35

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454

references

[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"




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