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ABOUT THIS RECORD
ID:
MNEST024766
species:
Branchiostoma floridae
source:
miRBase, original name:
bfl-mir-4882c
(
MI0017651
)
Taxonomy by NCBI:
Branchiostoma floridae
Branchiostoma
Branchiostomidae
Cephalochordata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCGAGAAACCCTGCAAGTGAG
miRNA*
CACCTATAGGGTTCTCTCCT
mismatches:
5
bulges:
1
View larger
pre-miRNA
TTGGGTCACACTGGTCA
CACCTATAGGGTTCTCTCCT
GTGAAGAAACATGGAAGCAG
GCGAGAAACCCTGCAAGTGAG
ACCATTGTGACTAAT
dot-bracket secondary structure
...(((((((.(((((.
(((...((((((((((.(((
((..............))))
).))).)))))))...))).)
)))).)))))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M,
Evol Dev. 13:15-27(2011).
,
"microRNA complements in deuterostomes: origin and evolution of microRNAs"