miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST024785
species: Branchiostoma floridae
miRNA family: mir-4897
source: miRBase, original name: bfl-mir-4897b (MI0017671)

Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGCCGATTGATAGCTGCCAAT

miRNA*
TGGTGACTACCCATTGGTGGCT

mismatches: 6
bulges: 0

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pre-miRNA
TGCCCACTGATTGGTGACTACCCATTGGTGGCTTCCATTAGGTGGCTTCTGATTGGTGGTTGCCGATTGATAGCTGCCAATCAGTGGCTG

dot-bracket secondary structure
.(((.((((((((((..(((.(.(((((..(((.((((((((.....))))).))).)))..))))).).)))..)))))))))))))..


SIMILARITIES
miRBase bfl-mir-4897a: 1e-34

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454

references

[1] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M, Evol Dev. 13:15-27(2011)., "microRNA complements in deuterostomes: origin and evolution of microRNAs"




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