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ABOUT THIS RECORD

ID: MNEST025873
species: Gallus gallus
miRNA family: let-7
source: miRBase, original name: gga-let-7d (MI0001232)

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGAGGTAGTGGGTTGCATAGT

miRNA*
TATACAACCTGCTGCCTTTCT

mismatches: 4
bulges: 0

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pre-miRNA
ATTGGGCTCCTAGGAAGAGGTAGTGGGTTGCATAGTTTTAGGGCAGGGATTTTGCTCACAAGGAGGTAACTATACAACCTGCTGCCTTTCTTAGGGCTTT
ATT


dot-bracket secondary structure
...((((.(((((((.(((((((..(((((.((((((...((((((.....)))))).(.....)..)))))).)))))..)))))))))))))))))).
...



SIMILARITIES
miRBase mdo-let-7d: 5e-43

PMRD no hits

microPC no hits
UniProt no hits

RFAM let-7: 9e-42

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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references

[1] International Chicken Genome Sequencing Consortium, Nature. 432:695-716(2004)., "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"




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