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ABOUT THIS RECORD

ID: MNEST025875
species: Gallus gallus
miRNA family: let-7
source: miRBase, original name: gga-let-7g (MI0001230)

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTAGTTTGTACAGT

miRNA*
TGTACAGGCCACTGCCTTGCC

mismatches: 2
bulges: 0

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pre-miRNA
AGGCTGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCC

dot-bracket secondary structure
.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).)))))))))))


SIMILARITIES
miRBase tgu-let-7g-1: 6e-42

PMRD no hits

microPC no hits
UniProt no hits

RFAM let-7: 1e-40

Identical with: mmu-let-7g from miRBase (MNEST031761)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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evidence: cloned

references

[1] McBride D, Carre W, Law A, Clinton M, Unpublished.,
[2] International Chicken Genome Sequencing Consortium, Nature. 432:695-716(2004)., "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"




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