miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST025887
species:
Gallus gallus
miRNA family:
mir-9
source:
miRBase, original name:
gga-mir-9-1
(
MI0003694
)
Taxonomy by NCBI:
Gallus gallus
Gallus
Phasianinae
Phasianidae
Galliformes
Neognathae
Aves
Coelurosauria
Theropoda
Saurischia
Dinosauria
Archosauria
Sauria
Sauropsida
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTTTGGTTATCTAGCTGTATGA
miRNA*
ATAAAGCTAGAGAACCGAATGTA
mismatches:
3
bulges:
0
View larger
pre-miRNA
TTGGGTTGGTTTTTC
TCTTTGGTTATCTAGCTGTATGA
GTGTATGTGATATC
ATAAAGCTAGAGAACCGAATGTA
AAAACCCGCTCGC
dot-bracket secondary structure
..((((.(((((((.
(.(((((((.(((((((.(((((
.(((.....)))))
))).))))))).))))))).).)
)))))).))))..
SIMILARITIES
miRBase
dre-mir-9-4
:
2e-32
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-9: 6e-24
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record