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ABOUT THIS RECORD

ID: MNEST025887
species: Gallus gallus
miRNA family: mir-9
source: miRBase, original name: gga-mir-9-1 (MI0003694)

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTTTGGTTATCTAGCTGTATGA

miRNA*
ATAAAGCTAGAGAACCGAATGTA

mismatches: 3
bulges: 0

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pre-miRNA
TTGGGTTGGTTTTTCTCTTTGGTTATCTAGCTGTATGAGTGTATGTGATATCATAAAGCTAGAGAACCGAATGTAAAAACCCGCTCGC

dot-bracket secondary structure
..((((.(((((((.(.(((((((.(((((((.(((((.(((.....)))))))).))))))).))))))).).))))))).))))..


SIMILARITIES
miRBase dre-mir-9-4: 2e-32

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-9: 6e-24

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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