miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST026346
species: Gallus gallus
source: miRBase, original name: gga-mir-1845 (MI0008206)

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCGGCTGCGCCCGGAGGA

miRNA*
CTCCCGGCGTACATCCCGCCGGCA

mismatches: 1
bulges: 6

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pre-miRNA
GCTTCTTTCTCTTCCTCCCGGCGTACATCCCGCCGGCAGCACCGAGCATCGCCGGCTGCGCCCGGAGGAGGAGTTTAAACAGGAGT

dot-bracket secondary structure
((((((..((((((((((.((((((......((((((.((.....))...)))))))))))).)))))))))).......))))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Northern

references

[1] Shao P, Zhou H, Xiao ZD, He JH, Huang MB, Chen YQ, Qu LH, Gene. 418:34-40(2008)., "Identification of novel chicken microRNAs and analysis of their genomic organization"




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