ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-33
source: miRBase, original name: cfa-mir-33b (MI0010358)
SEQUENCE & STRUCTURE| miRNA GTGCATTGCTGTTGCATTGC miRNA* AGTGCCTCGGCAGTGCAGCCC mismatches: 2 bulges: 1 |
pre-miRNA
GCGGGCGGCCCCGCGGTGCATTGCTGTTGCATTGCACGTGAGTGACGCGGGTGCAGTGCCTCGGCAGTGCAGCCCGGAGCCGGCCCCTGGCACC
dot-bracket secondary structure
(((((((((.(((.((((((((((((..(((((((((.((.......)).)))))))))..)))))))))).))))).))).))))...))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
GCGGGCGGCCCCGCGGTGCATTGCTGTTGCATTGCACGTGAGTGACGCGGGTGCAGTGCCTCGGCAGTGCAGCCCGGAGCCGGCCCCTGGCACC
dot-bracket secondary structure
(((((((((.(((.((((((((((((..(((((((((.((.......)).)))))))))..)))))))))).))))).))).))))...))...
SIMILARITIES| miRBase mml-mir-33b: 1e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-33: 6e-24 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
