ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-17
source: miRBase, original name: cfa-mir-93 (MI0008110)
SEQUENCE & STRUCTURE| miRNA CAAAGTGCTGTTCGTGCAGGTAG miRNA* ACTGCTGAGCTAGCACTTCCCG mismatches: 2 bulges: 3 |
pre-miRNA
CAAAGTGCTGTTCGTGCAGGTAGTGTGATTACCTGACCTACTGCTGAGCTAGCACTTCCCG
dot-bracket secondary structure
..((((((((((((.((((.(((.((.(.....).)))))))))))))).)))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
CAAAGTGCTGTTCGTGCAGGTAGTGTGATTACCTGACCTACTGCTGAGCTAGCACTTCCCG
dot-bracket secondary structure
..((((((((((((.((((.(((.((.(.....).)))))))))))))).)))))))....
SIMILARITIES| miRBase age-mir-93: 5e-29 PMRD no hits microPC no hits | UniProt no hits RFAM mir-17: 0.00005 |
Identical with: age-mir-93 from miRBase (MNEST027499) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
