ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-96
source: miRBase, original name: cfa-mir-96 (MI0010356)
SEQUENCE & STRUCTURE| miRNA TTTGGCACTAGCACATTTTTGCT miRNA* CAATCATGTGCAGTGCCAATAT mismatches: 3 bulges: 1 |
pre-miRNA
CTGCTTGGCCGATTTTGGCACTAGCACATTTTTGCTTGTGTCTCTCCGCTCTGAGCAATCATGTGCAGTGCCAATATGGGAAAAGCGGG
dot-bracket secondary structure
((((((..((.((.((((((((.((((((..(((((((((......)))...))))))..)))))))))))))).)).))..)))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
CTGCTTGGCCGATTTTGGCACTAGCACATTTTTGCTTGTGTCTCTCCGCTCTGAGCAATCATGTGCAGTGCCAATATGGGAAAAGCGGG
dot-bracket secondary structure
((((((..((.((.((((((((.((((((..(((((((((......)))...))))))..)))))))))))))).)).))..)))))).
SIMILARITIES| miRBase rno-mir-96: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-96: 1e-37 |
Identical with: ppa-mir-96 from miRBase (MNEST030077) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
