ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-103
source: miRBase, original name: cfa-mir-103-1 (MI0008098)
SEQUENCE & STRUCTURE| miRNA AGCAGCATTGTACAGGGCTATGA miRNA* TCGGCTTCTTTACAGTGCTGCCTTG mismatches: 5 bulges: 2 |
pre-miRNA
TCGGCTTCTTTACAGTGCTGCCTTGTTGCATATGGATCAAGCAGCATTGTACAGGGCTATGA
dot-bracket secondary structure
..((((.((.(((((((((((.(((.(.(....).).)))))))))))))).))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
TCGGCTTCTTTACAGTGCTGCCTTGTTGCATATGGATCAAGCAGCATTGTACAGGGCTATGA
dot-bracket secondary structure
..((((.((.(((((((((((.(((.(.(....).).)))))))))))))).))))))....
SIMILARITIES| miRBase gga-mir-103-1: 1e-29 PMRD no hits microPC no hits | UniProt no hits RFAM mir-103: 3e-28 |
Identical with: rno-mir-103-1 from miRBase (MNEST032711) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
