miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST028180
species: Macaca nemestrina
miRNA family: mir-21
source: miRBase, original name: mne-mir-21 (MI0002625)

Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAGCTTATCAGACTGATGTTGA

miRNA*
AACACCAGTCGATGGGCTGTC

mismatches: 3
bulges: 1

View larger
pre-miRNA
TGTCGGGTAGCTTATCAGACTGATGTTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTGACA

dot-bracket secondary structure
.(((((..((((((((.(((((.(((((.((((.(.....)))))))))).)))))))))))))..))))).


SIMILARITIES
miRBase age-mir-21: 2e-35

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-21: 3e-22

Identical with: ggo-mir-21 from miRBase (MNEST028268)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"




Liczniki na strone;