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ABOUT THIS RECORD

ID: MNEST028182
species: Macaca nemestrina
miRNA family: mir-23
source: miRBase, original name: mne-mir-23a (MI0003056)

Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATCACATTGCCAGGGATTTCC

miRNA*
GGTTCCTGGGGATGGGATTT

mismatches: 2
bulges: 1

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pre-miRNA
GGCCGGCTGGGGTTCCTGGGGATGGGATTTGCTTCCTGTCACAAATCACATTGCCAGGGATTTCCAACCGACC

dot-bracket secondary structure
((.(((.((((((((((((.((((.((((((..........)))))).)))).))))))).))))).))).))


SIMILARITIES
miRBase mml-mir-23a: 5e-36

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-23: 5e-30

Identical with: ggo-mir-23a from miRBase (MNEST028269)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"




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