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ABOUT THIS RECORD

ID: MNEST028240
species: Macaca nemestrina
miRNA family: mir-224
source: miRBase, original name: mne-mir-224 (MI0002907)

Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAAGTCACTAGTGGTTCCGTTTA

miRNA*
AATGGTGCCCTAGTGACTACAA

mismatches: 4
bulges: 1

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pre-miRNA
GGGCTTTCAAGTCACTAGTGGTTCCGTTTAGTAGATGATTGTGCATTGTTTCAAAATGGTGCCCTAGTGACTACAAAGCCC

dot-bracket secondary structure
(((((((..(((((((((.(((.((((((.(.(((..((.....))..)))).)))))).))))))))))))..)))))))


SIMILARITIES
miRBase mml-mir-224: 9e-41

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-224: 2e-32

Identical with: mml-mir-224 from miRBase (MNEST027822)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"




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