ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1249
source: miRBase, original name: ptr-mir-1249 (MI0008455)
SEQUENCE & STRUCTURE| miRNA ACGCCCTTCCCCCCCTTCTTCA miRNA* GAGGAGGGAGGAGATGGGCCAAGTTC mismatches: 3 bulges: 4 |
pre-miRNA
GGGAGGAGGGAGGAGATGGGCCAAGTTCCCTCTGGCTGGAACGCCCTTCCCCCCCTTCTTCACCT
dot-bracket secondary structure
.(((((((((.((.((.((((...(((((........))))))))).)).)))))))))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GGGAGGAGGGAGGAGATGGGCCAAGTTCCCTCTGGCTGGAACGCCCTTCCCCCCCTTCTTCACCT
dot-bracket secondary structure
.(((((((((.((.((.((((...(((((........))))))))).)).)))))))))))....
SIMILARITIES| miRBase hsa-mir-1249: 3e-21 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1249: 0.000000000000004 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
