ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1250
source: miRBase, original name: ptr-mir-1250 (MI0008456)
SEQUENCE & STRUCTURE| miRNA ACGGTGCTGGATGTGGCCTTT miRNA* AGGCCACATTTTCCAGCCCATTCA mismatches: 1 bulges: 5 |
pre-miRNA
CTGTCCCGCTGGCCTGGCAGGTGACGGTGCTGGATGTGGCCTTTTTGCCTTTTCTAAAGGCCACATTTTCCAGCCCATTCAACCTTCCAGAGCCCTCTGA
AGTGGCCACAGG
dot-bracket secondary structure
((((.((((((((((((.((((((.((.((((((((((((((((...........))))))))))...))))))))..)).)))).)))).)))......
)))))..)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CTGTCCCGCTGGCCTGGCAGGTGACGGTGCTGGATGTGGCCTTTTTGCCTTTTCTAAAGGCCACATTTTCCAGCCCATTCAACCTTCCAGAGCCCTCTGA
AGTGGCCACAGG
dot-bracket secondary structure
((((.((((((((((((.((((((.((.((((((((((((((((...........))))))))))...))))))))..)).)))).)))).)))......
)))))..)))).
SIMILARITIES| miRBase hsa-mir-1250: 4e-59 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: hsa-mir-1250 from miRBase (MNEST029095) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
