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ABOUT THIS RECORD

ID: MNEST030676
species: Pan troglodytes
miRNA family: mir-1254
source: miRBase, original name: ptr-mir-1254 (MI0008459)







SEQUENCE & STRUCTURE
miRNA
AGCCTGGAAGCTGGAGCCTGCAGT

miRNA*
TGTATTCCAGCCTAGGCAAC

mismatches: 1
bulges: 4

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pre-miRNA
GTGGGAGGATTGCTTGAGCCTGGAAGCTGGAGCCTGCAGTGAACTATCATTGTGCCACTGTATTCCAGCCTAGGCAACAAAATGAAATCCTGTCTA

dot-bracket secondary structure
..((.((((((..(((.((((((..(((((((..(((((((.((.......))..))))))))))))))))))))..))).....)))))).))..


SIMILARITIES
miRBase hsa-mir-1254: 3e-47

PMRD no hits

microPC no hits
UniProt sp|Q5T7P6|TMM78_HUMAN: 0.001

RFAM Metazoa_SRP: 0.00002

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"




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