ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1262
source: miRBase, original name: ptr-mir-1262 (MI0008466)
SEQUENCE & STRUCTURE| miRNA ATGGGTGAATTTGTAGAAGGAT miRNA* CCTTCTGGGAACTAATTTTTGGCCTTCAA mismatches: 4 bulges: 7 |
pre-miRNA
ATCTACAATGGTGATGGGTGAATTTGTAGAAGGATGAAAGTCAAAGAATCCTTCTGGGAACTAATTTTTGGCCTTCAACAAGAATTGTGATA
dot-bracket secondary structure
(((.(((((.((...((((.(((((.(((((((((............))))))))).))).......)).))))...))....)))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ATCTACAATGGTGATGGGTGAATTTGTAGAAGGATGAAAGTCAAAGAATCCTTCTGGGAACTAATTTTTGGCCTTCAACAAGAATTGTGATA
dot-bracket secondary structure
(((.(((((.((...((((.(((((.(((((((((............))))))))).))).......)).))))...))....)))))))).
SIMILARITIES| miRBase hsa-mir-1262: 3e-47 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: hsa-mir-1262 from miRBase (MNEST029110) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
