ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-7
source: miRBase, original name: ppy-mir-7-3 (MI0014790)
SEQUENCE & STRUCTURE| miRNA TGGAAGACTAGTGATTTTGTT miRNA* CAAGTCACAGCCGGCCTCA mismatches: 4 bulges: 2 |
pre-miRNA
AGATTAGAGTGGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGATGTACTATGACAACAAGTCACAGCCGGCCTCATAGCGCAGAC
TCCCTTCGAC
dot-bracket secondary structure
......(((.((....(((((.((((((((.((..(.((.(((((((.((((((.((......)).))))))))))))))).)..)).))))))))))))
))).)))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
AGATTAGAGTGGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGATGTACTATGACAACAAGTCACAGCCGGCCTCATAGCGCAGAC
TCCCTTCGAC
dot-bracket secondary structure
......(((.((....(((((.((((((((.((..(.((.(((((((.((((((.((......)).))))))))))))))).)..)).))))))))))))
))).)))...
SIMILARITIES| miRBase hsa-mir-7-3: 2e-55 PMRD no hits microPC no hits | UniProt no hits RFAM mir-7: 6e-37 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
