miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST032624
species: Mus musculus
source: miRBase, original name: mmu-mir-5123 (MI0018034)

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTAGATCCATATGCCATGGTGTG

miRNA*
TGCCATGGTGTGTAGATCCATATG

mismatches: 2
bulges: 0

View larger
pre-miRNA
CATATGCCATGGTGTGTAGATCCATATGCCATGGTGTGTAGACCCATATGCCATGGTGTGTAGATCCATATGCCATGGTGTGT

dot-bracket secondary structure
.((((((((((((((((.((((.((((((((((((((((......)))))))))))))))).)))).))))))))))))))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references

[1] Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S, Blood. [Epub prior to print](2011)., "Ordered progression of stage specific miRNA profiles in the mouse B2 B cell lineage"




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