miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST032630
species: Mus musculus
source: miRBase, original name: mmu-mir-5129 (MI0018041)

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGTGGGGGCATTGGTATTTTC

miRNA*
ATGTGCCTGTGCATCTCTTCCCACAGTG

mismatches: 3
bulges: 6

View larger
pre-miRNA
TCACCTGAATATGTGGGGGCATTGGTATTTTCAAAGCAGCATTTTGAATGTGCCTGTGCATCTCTTCCCACAGTGGTG

dot-bracket secondary structure
.((((......(((((((((((.(((((.(((((((.....))))))).))))).))))......)))))))..))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references

[1] Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S, Blood. [Epub prior to print](2011)., "Ordered progression of stage specific miRNA profiles in the mouse B2 B cell lineage"




Liczniki na strone;