ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: mir-989
source: miRBase, original name: aga-mir-989 (MI0006242)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGATGTGACGTAGTGGTAC miRNA* GCCGCTACGTTGCTTTCACTTG mismatches: 6 bulges: 1 |
pre-miRNA
GGACAGTACAGTGGCCACGGGGGTACGCCGCTACGTTGCTTTCACTTGGTACGCTCGTATAGTATAGAGCTAAAAGTAAACATAGATCCATGTGATGTGA
CGTAGTGGTACCCTCCCGTGTCTATCACAAC
dot-bracket secondary structure
.....((...((((.((((((((...((((((((((..(..((((.(((...((((..........)))).....(....)......))).)))).)..)
)))))))))...)))))))).)))).))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"
GGACAGTACAGTGGCCACGGGGGTACGCCGCTACGTTGCTTTCACTTGGTACGCTCGTATAGTATAGAGCTAAAAGTAAACATAGATCCATGTGATGTGA
CGTAGTGGTACCCTCCCGTGTCTATCACAAC
dot-bracket secondary structure
.....((...((((.((((((((...((((((((((..(..((((.(((...((((..........)))).....(....)......))).)))).)..)
)))))))))...)))))))).)))).))...
SIMILARITIES| miRBase aae-mir-989: 0.0000000004 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"
