ABOUT THIS RECORDspecies: Anopheles gambiae
source: miRBase, original name: aga-mir-1174 (MI0006237)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAGATCTACTTCATACCCATG miRNA* TGGGTATTTTAGATCATCGACA mismatches: 3 bulges: 4 |
pre-miRNA
GCTACGATCGTGGGTATTTTAGATCATCGACAGACCAAGGCACTTTCGTCACTGGCATTGTAAGGCCGAGCAGATGCGGCCTCAACCCAAACCCTCACCC
GTGGTTCGCATCTGCTCCCGTCCAGTGCCCTGTCCAACCATACTGTCAGATCTACTTCATACCCATGAATGGTGGCG
dot-bracket secondary structure
(((((.(((((((((((..((((((...(((((.....(((......)))...(((((((...((..((((((((((((((.(.................
).)).))))))))))))))...))))))).............))))).))))))....))))))))).)).))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"
GCTACGATCGTGGGTATTTTAGATCATCGACAGACCAAGGCACTTTCGTCACTGGCATTGTAAGGCCGAGCAGATGCGGCCTCAACCCAAACCCTCACCC
GTGGTTCGCATCTGCTCCCGTCCAGTGCCCTGTCCAACCATACTGTCAGATCTACTTCATACCCATGAATGGTGGCG
dot-bracket secondary structure
(((((.(((((((((((..((((((...(((((.....(((......)))...(((((((...((..((((((((((((((.(.................
).)).))))))))))))))...))))))).............))))).))))))....))))))))).)).))))).
SIMILARITIES| miRBase aae-mir-1174: 0.0005 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"
