ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: mir-1891
source: miRBase, original name: aga-mir-1891 (MI0008312)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGGAGTTAATTTGCGTGTTTT miRNA* AACACGTCCATTAACTCTGGTAC mismatches: 6 bulges: 0 |
pre-miRNA
GCCTCCTCTTTTTCCGTCATGTTGAGGAGTTAATTTGCGTGTTTTTATATTTGATTAAACACGTCCATTAACTCTGGTACATGATGGTAAAAGCGAGCAA
C
dot-bracket secondary structure
((.((..(((((.(((((((((...(((((((((..((((((((............))))))))..)))))))))...))))))))).))))).))))..
.
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Mead EA, Tu Z, BMC Genomics. 9:244(2008)., "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi"
GCCTCCTCTTTTTCCGTCATGTTGAGGAGTTAATTTGCGTGTTTTTATATTTGATTAAACACGTCCATTAACTCTGGTACATGATGGTAAAAGCGAGCAA
C
dot-bracket secondary structure
((.((..(((((.(((((((((...(((((((((..((((((((............))))))))..)))))))))...))))))))).))))).))))..
.
SIMILARITIES| miRBase aae-mir-1891-2: 5e-40 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Mead EA, Tu Z, BMC Genomics. 9:244(2008)., "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi"
