miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST035353
species: Apis mellifera
miRNA family: mir-2
source: miRBase, original name: ame-mir-13b (MI0010609)

Taxonomy by NCBI:
Apis mellifera Apis Apini Apinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATCACAGCCATTTTTGACGATT

miRNA*
CGTCAAATTGGTTGTGGCGTG

mismatches: 4
bulges: 1

View larger
pre-miRNA
GCGATCCAATCGTCAAATTGGTTGTGGCGTGTTGCTTTTCTAGATTTCATATCACAGCCATTTTTGACGATTTGGATCG

dot-bracket secondary structure
.((((((((((((((((.((((((((..(((...((.....))....)))..))))))))..)))))))).))))))))


SIMILARITIES
miRBase nvi-mir-13b: 7e-20

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-2: 1e-33

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Griffiths-Jones S, Unpublished (2009).,




Liczniki na strone;