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ABOUT THIS RECORD
ID:
MNEST035360
species:
Apis mellifera
miRNA family:
mir-9
source:
miRBase, original name:
ame-mir-79
(
MI0005742
)
Taxonomy by NCBI:
Apis mellifera
Apis
Apini
Apinae
Apidae
Apoidea
Aculeata
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAAGCTAGATTACCAAAGCA
miRNA*
CTTTGGTAATATAGCTCTATG
mismatches:
3
bulges:
0
View larger
pre-miRNA
TTCAAGACTGTCAAAGCTTTTGCCTTTA
CTTTGGTAATATAGCTCTATG
ATTTTAATTAAGGATCA
TAAAGCTAGATTACCAAAGCA
AAGAGCACTAGCA
dot-bracket secondary structure
...............(((..(((((((.
((((((((((.(((((.((((
(((((.....)))))))
)).))))).)))))))))).)
))).)))..))).
SIMILARITIES
miRBase
ame-mir-9b
:
2e-45
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-9: 2e-27
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG,
Genome Biol. 8:R97(2007).
,
"Computational and transcriptional evidence for microRNAs in the honey bee genome"